BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021B09LP1|AL427721
(970 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1595 1618 0.0
>3x_Contig1595
Length = 10795
Score = 1618 bits (814), Expect = 0.0
Identities = 831/837 (99%), Gaps = 1/837 (0%)
Strand = Plus / Plus
Query: 1 gatcaaaaccgaattagatgtatagtgaggatactaagacacttggcatggttgaaggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2548 gatcaaaaccgaattagatgtatagtgaggatactaagacacttggcatggttgaaggag 2607
Query: 61 aaatcaggagaggcactggatgacgttttgtccgtccctttgaaaattcccgtcactcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2608 aaatcaggagaggcactggatgacgttttgtccgtccctttgaaaattcccgtcactcac 2667
Query: 121 tatttcatgagatgtcagcaccaagtaccgaacaaaatcggagcatttaaagcactccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2668 tatttcatgagatgtcagcaccaagtaccgaacaaaatcggagcatttaaagcactccta 2727
Query: 181 ctgcaatcagtggaggaagggttccagcaatggtaccaattgatggagagcacaccaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2728 ctgcaatcagtggaggaagggttccagcaatggtaccaattgatggagagcacaccaaca 2787
Query: 241 gtaccttcggtactggtagacgacacaaacctaagcctaccacccggagtcctcactgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2788 gtaccttcggtactggtagacgacacaaacctaagcctaccacccggagtcctcactgcc 2847
Query: 301 agtgttgccgatactgctactgctactgcccctcccccttcccatcacgtgaccacggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2848 agtgttgccgatactgctactgctactgcccctcccccttcccatcacgtgaccacggat 2907
Query: 361 ttcataccaaaaccgtttaaagcaagcagcagtggtagcaatgccagcagtaccaccagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2908 ttcataccaaaaccgtttaaagcaagcagcagtggtagcaatgccagcagtaccaccagc 2967
Query: 421 agtacagccggcagccatactgccacgaccacagctgaccctcgagagaaacgtaggagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2968 agtacagccggcagccatactgccacgaccacagctgaccctcgagagaaacgtaggagt 3027
Query: 481 ggcacaccgttgctccaaatcatgcccgacgtgtcttcttccacgtagagcaaacaccca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3028 ggcacaccgttgctccaaatcatgcccgacgtgtcttcttccacgtagagcaaacaccca 3087
Query: 541 aaggtttttccggacttgtcacacccggaaaaatcagcaaatcgagagccacgatgaaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3088 aaggtttttccggacttgtcacacccggaaaaatcagcaaatcgagagccacgatgaaca 3147
Query: 601 aatcccgcagtgaatgaccgggggaatctcatggaacaacctggcagatgttccatcgca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3148 aatcccgcagtgaatgaccgggggaatctcatggaacaacctggcagatgttccatcgca 3207
Query: 661 gaaggggaaagggctgtaggaaaaaggacttaagattgcggacccaccaattcggattag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3208 gaaggggaaagggctgtaggaaaaaggacttaagattgcggacccaccaattcggattag 3267
Query: 721 atcacgtcacgtcacgtgaskattnttaaattcaacaccatacacacacttaccaatcca 780
||||||||||||||||||| | || ||||||||||||||||||||||||||||||||
Sbjct: 3268 atcacgtcacgtcacgtgacg-tgatttaattcaacaccatacacacacttaccaatcca 3326
Query: 781 tgtgtactatcgtcgctatatacaggctcttacatagacattgtaccacgtacgaag 837
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3327 tgtgtactatcgtcgctatatacaggctcttacatagacattgtaccacgtacgaag 3383
Score = 219 bits (110), Expect = 1e-56
Identities = 118/120 (98%), Gaps = 1/120 (0%)
Strand = Plus / Plus
Query: 851 ggacacccaaatagcaggagttgtcctttcgatgtatgttcacgctgcactgcactgcac 910
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3398 ggacacccaa-tagcaggagttgtcctttcgatgtatgttcacgctgcactgcactgcac 3456
Query: 911 tgcggtttggcacagcacccaaataaccggaaaacctcactctgtkacggtcaggtgaaa 970
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3457 tgcggtttggcacagcacccaaataaccggaaaacctcactctgtgacggtcaggtgaaa 3516
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4216
Number of Sequences: 1807
Number of extensions: 4216
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 970
length of database: 10,358,551
effective HSP length: 16
effective length of query: 954
effective length of database: 10,329,639
effective search space: 9854475606
effective search space used: 9854475606
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)